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Table 4 Experimental results of the GENIA protein subcategory annotations plus AIMed and GENETAG, respectively

From: Investigating heterogeneous protein annotations toward cross-corpora utilization

  

AIMed + GENIA

GENETAG + GENIA

Matching criterion

Protein subcategory

Precision

Recall

F-score

Precision

Recall

F-score

Exact

complex

76.60

41.38

53.73

77.27

27.97

41.07

 

domain_or_region

78.74

41.63

54.47

75.94

27.46

40.34

 

ETC

81.38

40.74

54.30

78.89

26.58

39.77

 

family_or_group

68.49

41.63

51.79

73.58

34.61

47.08

 

molecule

81.83

66.16

73.16

74.78

47.99

58.46

 

substructure

81.27

41.00

54.50

78.46

26.52

39.64

 

subunit

82.40

43.04

56.54

79.16

27.53

40.85

Partial

complex

91.96

49.68

64.51

92.89

33.63

49.38

 

domain_or_region

88.41

46.74

61.15

90.45

32.71

48.05

 

ETC

91.58

45.85

61.11

93.77

31.59

47.26

 

family_or_group

81.09

49.30

61.32

88.62

41.69

56.70

 

molecule

91.47

73.95

81.78

92.40

59.30

72.24

 

substructure

91.39

46.10

61.29

93.99

31.76

47.48

 

subunit

91.93

48.02

63.09

93.77

32.61

48.39