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Table 4 Experimental results of the GENIA protein subcategory annotations plus AIMed and GENETAG, respectively

From: Investigating heterogeneous protein annotations toward cross-corpora utilization

   AIMed + GENIA GENETAG + GENIA
Matching criterion Protein subcategory Precision Recall F-score Precision Recall F-score
Exact complex 76.60 41.38 53.73 77.27 27.97 41.07
  domain_or_region 78.74 41.63 54.47 75.94 27.46 40.34
  ETC 81.38 40.74 54.30 78.89 26.58 39.77
  family_or_group 68.49 41.63 51.79 73.58 34.61 47.08
  molecule 81.83 66.16 73.16 74.78 47.99 58.46
  substructure 81.27 41.00 54.50 78.46 26.52 39.64
  subunit 82.40 43.04 56.54 79.16 27.53 40.85
Partial complex 91.96 49.68 64.51 92.89 33.63 49.38
  domain_or_region 88.41 46.74 61.15 90.45 32.71 48.05
  ETC 91.58 45.85 61.11 93.77 31.59 47.26
  family_or_group 81.09 49.30 61.32 88.62 41.69 56.70
  molecule 91.47 73.95 81.78 92.40 59.30 72.24
  substructure 91.39 46.10 61.29 93.99 31.76 47.48
  subunit 91.93 48.02 63.09 93.77 32.61 48.39