From: Investigating heterogeneous protein annotations toward cross-corpora utilization
No. | Data | Criterion | Precision | Recall | F-score |
---|---|---|---|---|---|
1 | AIMed+ molecule+ subunit | Exact | 81.69 | 66.67 | 73.42 |
 |  | Partial | 91.39 | 74.58 | 82.14 |
 | AIMed+ molecule+ subunit+ complex | Exact | 77.78 | 66.16 | 71.50 |
 |  | Partial | 91.14 | 77.52 | 83.78 |
 | AIMed+ molecule+ subunit+ complex+ domain | Exact | 76.45 | 67.18 | 71.52 |
 |  | Partial | 89.39 | 78.54 | 83.62 |
2 | GENETAG+ molecule+ family | Exact | 71.08 | 55.03 | 62.03 |
 |  | Partial | 87.40 | 67.66 | 76.27 |
 | GENETAG+ molecule+ family+ subunit+ complex+ domain | Exact | 69.90 | 58.28 | 63.56 |
 |  | Partial | 85.30 | 71.11 | 77.56 |
3 | AIMed+ DNA | Exact | 75.69 | 41.76 | 53.83 |
 |  | Partial | 87.96 | 48.53 | 62.55 |
 | AIMed+ filtered DNA | Exact | 80.48 | 42.66 | 55.76 |
 |  | Partial | 92.29 | 48.91 | 63.94 |
4 | GENETAG+ DNA | Exact | 69.82 | 36.44 | 47.89 |
 |  | Partial | 83.97 | 43.82 | 57.59 |
 | GENETAG+ filtered DNA | Exact | 76.57 | 35.18 | 48.21 |
 |  | Partial | 92.70 | 42.60 | 58.38 |
5 | AIMed+ molecule+ subunit+ complex+ filtered DNA | Exact | 77.49 | 67.69 | 72.26 |
 |  | Partial | 91.37 | 79.82 | 85.21 |
 | AIMed+ molecule+ subunit+ complex+ domain+ filtered DNA | Exact | 75.78 | 68.33 | 71.86 |
 |  | Partial | 89.09 | 80.33 | 84.49 |
 | GENETAG+ molecule+ family+ subunit+ complex+ domain+ filtered DNA | Exact | 70.97 | 66.14 | 68.47 |
 |  | Partial | 85.14 | 79.34 | 82.14 |
 | GENETAG+ molecule+ family+ subunit+ complex+ domain+ filtered DNA+ RNA | Exact | 71.34 | 67.02 | 69.11 |
 |  | Partial | 84.82 | 79.68 | 82.17 |
6 | pure AIMed | Exact | 80.44 | 75.10 | 77.68 |
 |  | Partial | 88.24 | 82.38 | 85.20 |
 | AIMed + GENIA Protein | Exact | 65.06 | 67.31 | 66.16 |
 |  | Partial | 78.89 | 81.61 | 80.23 |
7 | pure GENETAG | Exact | 71.38 | 68.00 | 69.65 |
 |  | Partial | 86.21 | 82.12 | 84.11 |
 | GENETAG + GENIA Protein | Exact | 69.75 | 58.48 | 63.62 |
 |  | Partial | 84.77 | 71.08 | 77.33 |