Figure 1From: An efficient algorithm for the stochastic simulation of the hybridization of DNA to microarraysStructure of the hybridization table (HT). Rate constants and populations are stored in such a way as to simplify the calculation of the quantities α j , ϕ j , α and Φ (See Eqs. 7, 8, 9, and 10) thereby reducing the number of operations per time step of the simulation from O(2N P N T ) to O(N P + N T ).Back to article page