Skip to main content

Table 6 The sensitivity of different methods on the Lindahl dataset at the family, superfamily, and fold levels.a, b

From: DescFold: A web server for protein fold recognition

Method

Family level (%)

Superfamily level (%)

Fold level (%)

 

Top 1

Top 5

Top 1

Top 5

Top 1

Top 5

Psi-blastc

71.2

72.3

27.4

27.9

4.0

4.7

Fuguec

82.2

85.8

41.9

53.2

12.5

26.8

FOLDproc

85.0

89.9

55.0

70.0

26.5

48.3

HHpredd

82.9

87.1

58.0

70.0

25.2

39.4

Sparksd

81.6

88.1

52.5

69.1

24.3

47.7

SP3d

81.6

86.8

55.3

67.7

28.7

47.4

SP4d

80.9

86.3

57.8

68.9

30.8

53.6

SP5d

82.4

87.6

59.8

70.0

37.9

58.7

DescFold_Ie

80.7

88.5

57.8

69.1

24.9

55.8

DescFold_IIf

81.1

88.5

60.6

72.4

32.4

59.8

  1. a The sensitivity is defined by the percentage of query proteins having at least one correct hit ranked first, or within the top 5.
  2. bValues in bold are the best results.
  3. cThe results were cited from Ref. [25].
  4. d The results were cited from Ref. [16].
  5. e DescFold_I was based on the SSEA-, Psi-blast-, Rps-blast-, and PPA-based descriptors.
  6. f DescFold_II was based on the SSEA-, Psi-blast-, Rps-blast-, motif-, and PPA-based descriptors.