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Figure 2 | BMC Bioinformatics

Figure 2

From: Graphle: Interactive exploration of large, dense graphs

Figure 2

The Graphle client user interface. A user can specify one or more genes that are sent as a query to the server. This information allows the server to execute a graph query in the underlying large biological network specified by the requested organism and biological context. A subgraph comprising ~50 vertices total is returned to the client, which then lays out and displays in real time the most informative portion of this subgraph. The visible subgraph can be controlled by modifying the edge and vertex cutoffs. Detailed information on the numerical scores of the selected vertex and its incident edges are shown on the right. The current subgraph can be exported as an image (e.g. for publication) or as raw data (e.g. for further analysis).

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