Table 1 CHESS's main features
Features | ACE-it | ISACGH | VAMP | SIGMA2 | CGH Analytics | CHESS |
|---|---|---|---|---|---|---|
Built-in GA detection | ✓ | ✓ | ✓ | ✓ | ✓ | |
Frequent GA region definition | ✓ | ✓ | ✓ | ✓ | ✓ | |
Case/control study | ✓ | ✓ | ||||
Enrichment analysis for GO and KEGG | ✓ | ✓ | ||||
Integrative analysis of genomic CGH and gene expression | ✓(1) | ✓(2) | ✓(2) | ✓(3) | ✓(2) | ✓(6) |
Free for academic | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
Web accessible | ✓ | ✓ | ✓ |