In Silico Evaluation of Predicted Regulatory Interactions in Arabidopsis thaliana

BMC Bioinformatics

Table 1 Summary of Microarray Datasets Used in this TF→target prediction study.

Transcription Factor Mutant/Transgenic	Treatment	Control	# of Replicate Experiments	Citation
MIF1	Light	Dark	2	Hu et al., (2006)
WRKY11	Pathogen	Water	3	Journot-Catalino (2006)
WRKY17	Pathogen	Water	3	Journot-Catalino (2006)
ARR7	Cytokinin	Water	2	Lee et al., (2006)

Microarray datasets were obtained from publicly available datasets (see Methods for details). This table describes the specific transcription factor being mutagenized in these studies, the type of treatment used in wild-type and mutant/transgenic plants, the control for these treatments, the number of biological replicates in each experiment and the author of the microarray dataset (see reference section for a detailed citation).

ISSN: 1471-2105