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Table 7 Classification Performance on the Local Structure Alphabet Dataset.

From: svm PRAT: SVM-based Protein Residue Annotation Toolkit

  w= f= 5 w= f= 7 w= f= 9
  ROC Q 16 ROC Q 16 ROC Q 16
0.82 64.9 0.81 64.7 0.81 64.2
0.83 67.3 0.82 67.7 0.82 67.7
0.84 66.4 0.84 66.9 0.83 67.2
0.85 68.0 0.84 68.5 0.83 68.9**
  1. w = f gave the best results on testing on few sample points, and hence due to the expensive nature of this problem, we did not test it on a wide set of parameters. ** denotes the best scoring model based on the Q16 scores. For this best model the se rate of 0.21.
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