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Table 4 Dataset (II)

From: ReseqChip: Automated integration of multiple local context probe data from the MitoChip array in mitochondrial DNA sequence assembly

  

Sub

Del

Ins

Total

Homoplasmic

All

985 (166)

15 (3)

246 (3)

1246 (172)

 

Train

336 (110)

4 (3)

86 (2)

426 (112)

 

Test

649 (143)

11 (2)

160 (3)

820 (148)

Heteroplasmic

All

205 (39)

0

14 (2)

219 (41)

 

Train

75 (36)

0

6 (2)

81 (38)

 

Test

130 (39)

0

8 (2)

138 (41)

Total

All

1190 (166)

15 (3)

260 (3)

1465 (172)

 

Train

411 (116)

4 (3)

92 (3)

507 (122)

 

Test

779 (143)

11 (2)

168 (3)

958 (148)

  1. Number of variable sites in the dataset are listed and stratified by type of variation and homoplas-mic/heteroplasmic state. (In brackets the number of distinct SNPs are given.)