Table 4 Comparison of methods for assigning significance.
From: A general modular framework for gene set enrichment analysis
| Â | parametric | resampling | permutation | restandardization |
|---|---|---|---|---|
set 1 | 0.82 | 0.67 | 0.59 | 0.66 |
set 2 | 1.00 | 0.92 | 1.00 | 0.92 |
set 3 | 0.03 | 0.01 | 0.06 | 0.01 |
set 4 | 0.60 | 0.44 | 0.51 | 0.43 |
set 5 | 0.85 | 0.41 | 0.90 | 0.41 |
set 6 | 0.96 | 0.85 | 0.83 | 0.84 |
set 7 | 1.00 | 1.00 | 1.00 | 1.00 |
set 8 | 0.90 | 0.70 | 0.79 | 0.68 |
set 9 | 0.99 | 0.90 | 1.00 | 0.87 |