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Table 6 Performance of the Hotelling approach using a shrinkage correlation matrix.

From: A general modular framework for gene set enrichment analysis

 

resampling

permutation

restandardization

set 1

0.09

0.18

0.08

set 2

0.92

1.00

0.92

set 3

0.01

0.05

0.01

set 4

0.06

0.16

0.05

set 5

0.41

0.91

0.40

set 6

0.25

0.26

0.22

set 7

1.00

1.00

1.00

set 8

0.25

0.51

0.25

set 9

0.89

1.00

0.87

  1. The indicated values are the proportion of p-values ≤ 0.05.