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Figure 3 | BMC Bioinformatics

Figure 3

From: The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation

Figure 3

A 'lost' peptide in CG30084. Shown here is part of the gene CG30084 (it was called tun in release 4) of the FlyBase annotation. Within the FlyBase release 3.2 it was annotated to encode the 4 protein isoforms CG30084-PA, CG30084-PB, CG30084-PC, and CG30084-PD (shown in dark grey). The PeptideAtlas peptide PAp00061581 (PSIASITAPGSASAPAPVPSAAPTK) was part of the splice variant CG30084-PB (red frame, PAp00061581 highlighted in yellow). The annotations of the subsequent release 4.3 are shown in beige color. As one can see, none of the 4 isoforms in this newer release (CG30084-PA,-PC,-PE, and -PF) can account for the observed peptide.

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BMC Bioinformatics

ISSN: 1471-2105

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