The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation

Table 1 Databases used in this study.

	Ensembl	FlyBase
	Eu- and Heterochromatin	Euchromatin	Heterochromatin
Search against protein database	v27.3c	r3.2	-
Search against 6-frame translation of DNA	v31e	r3.2.1	-
Reference database for coordinate resolution	v42	r4.3	r3.2b2

Listed in the different columns are the Ensembl database releases used for searching and the FlyBase/BDGP releases they correspond to.

ISSN: 1471-2105