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Table 8 Reduced alphabets compared to the DualRMI strategy.

From: Automated Alphabet Reduction for Protein Datasets

Name Description #letters Reference
WW5 AHT/CFILMVWY/DE/GP/KNQRS/X 6 [9]
SR5 AEHKQRST/CFILMVWY/DN/G/P/X 6 [6]
MU4 AGPST/CILMV/DEHKNQR/FYW/X 5 [46]
MM5 AG/C/DEKNPQRST/FILMVWY/H/X 6 [16]
HD1 AV/CGNP/D/EKRQ/FWYH/ILM/ST/X 8 This work
HD2 AV/CGNP/D/EKR/Q/FWY/H/ILM/ST/X 10 This work
HD3 AV/C/GNP/D/EKR/Q/FWY/H/IL/M/ST/X 12 This work
  1. These alphabets have been extended with a letter corresponding to the end of chain symbol. HD n = Human Designed alphabet n.