From: Genotyping and inflated type I error rate in genome-wide association case/control studies
Method | n | p < 0.005 | p < 0.001 | p < 0.0005 |
---|---|---|---|---|
BeadStudio | 3487 | 0.015 | 0.005 | 0.004 |
logiCALL | 5533 | 0.004 | 0.002 | 0.002 |
LR | 5533 | 0.087 | 0.061 | 0.052 |
LR-(same) | 3014 | 0.006 | 0.002 | 0.001 |