Table 3 Genes selected by the iterative BMA algorithm and their corresponding posterior probabilities, univariate log likelihood rankings, and descriptions on the breast cancer data (p = 1000, nbest = 50, maxNvar = 15, and cutPoint = 60).
Selected genes | Posterior Probability (%) | Univariate Cox ranking | Gene description |
|---|---|---|---|
NM_000767 | 100.0 | 437 | cytochrome P450, subfamily IIB (phenobarbital-inducible) |
NM_002019 | 100.0 | 533 | fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) |
Contig47102_RC | 100.0 | 564 | no description available |
NM_013989 | 100.0 | 765 | deiodinase, iodothyronine, type II (DIO2), transcript variant 1, mRNA |
NM_018965 | 100.0 | 935 | triggering receptor expressed on myeloid cells 2 |
NM_021151 | 99.0 | 956 | carnitine O- octanoyltransferase |
AF063936 | 43.9 | 984 | putative neuronal cell adhesion molecule |
NM_004911 | 40.6 | 998 | protein disulfide isomerase related protein (calcium-binding protein, intestinal-related) |
NM_014862 | 29.5 | 994 | KIAA0307 gene product |
Contig40146 | 19.0 | 996 | wi84e 12.x1 NCI_CGAP_Kid12 Homo sapiens cDNA clone IMAGE : 2400046 3' similar to SW: RASD_DICDI P03967 RAS- LIKE PROTEIN RASD;, mRNA sequence |
NM_012319 | 17.6 | 993 | LIV-1 protein, estrogen regulated |
NM_002411 | 13.1 | 995 | secretoglobin, family 2A, member 2 (SCGB2A2), mRNA |
NM_003645 | 10.7 | 997 | fatty-acid-Coenzyme A ligase, very long-chain 1 |
NM_012415 | 10.3 | 1000 | RAD54 homolog B (S. cerevisiae), transcript variant 1, mRNA (cDNA Clone, ORF Clone) |
NM_015972 | 9.4 | 999 | polymerase (RNA) I polypeptide D, 16 kDa |