Table 5 Simulations of 13 LD Models for H4M4 model.
From: Performance of random forest when SNPs are in linkage disequilibrium
Number of SNPs of each class | ||||||
|---|---|---|---|---|---|---|
LD models | rSNP | nSNP | nSNP | LD.rSNP per rSNP | LD.nSNP per SNP97:100 | Total |
| Â | SNP1:4 | SNP5:96 | SNP97:100 | Â | Â | Â |
n0 | 4 | 92 | 4 | 0 | 0 | 100 |
n1 | 4 | 92 | 4 | 0 | 1 | 104 |
n2 | 4 | 92 | 4 | 0 | 2 | 108 |
n3 | 4 | 92 | 4 | 0 | 3 | 112 |
n4 | 4 | 92 | 4 | 0 | 4 | 116 |
r1 | 4 | 92 | 4 | 1 | 0 | 104 |
r2 | 4 | 92 | 4 | 2 | 0 | 108 |
r3 | 4 | 92 | 4 | 3 | 0 | 112 |
r4 | 4 | 92 | 4 | 4 | 0 | 116 |
r1n1 | 4 | 92 | 4 | 1 | 1 | 108 |
r2n2 | 4 | 92 | 4 | 2 | 2 | 116 |
r3n3 | 4 | 92 | 4 | 3 | 3 | 124 |
r4n4 | 4 | 92 | 4 | 4 | 4 | 132 |