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Figure 2 | BMC Bioinformatics

Figure 2

From: Kerfdr: a semi-parametric kernel-based approach to local false discovery rate estimation

Figure 2

Truncation. Root Mean Square Error (RMSE) between the true local FDR τ and the estimates as a function of the proportion 1 - π0 (log-log scale). Truncation: p* = 0 (untruncated: asterix), 10-3 (circle), 10-2 (cross). Estimation: naive (dotted), corrected (solid). Top: exponential shape for f1. Bottom: uniform shape. Left: μ = 0.001. Right: μ = 0.01. Variance of the RMSE lies between 1e-4 and 5e-4 with 500 simulations.

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