Clustering progress window (final state). The clustering progress window after completion of the clustering process. The scrollbar in the middle of the window may be used to browse through intermediate clustering results with a higher smoothing over the prototype profiles. In the upper plot, MarVis displays the prototypes of the selected clustering state according to the current colormap. By default, MarVis uses the Jet colormap, i.e. red colors represent high intensities and blue colors represent low intensities. The vertical axis represents the different data set conditions, the horizontal axis corresponds to the prototype numbers. In the lower plot, the number of marker candidates that are associated with each prototype are represented as vertical bars with different height.