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Table 1 Comparison of different short read sequencing technologies. Comparison of existing short read sequencing technologies in terms of throughput and read length.

From: Crystallizing short-read assemblies around seeds

Company

Machine

Throughput (per run)

Read length (base)

454

GS FLX

100 M bases/7 hours

100 or more

Helicos

HeliScope

2 G bases/day

around 25

Applied Biosystems

SOLiD

4 G bases

25 – 30

Solexa

Illumina Genome Analyzer

2 G bases/2 days

25 – 30