Table 3 Simulation results for p = 550 or 1, 100. The simulation results were averaged over 100 runs for p = 550 or 1, 100 (22 informative and either 528 or 1,078 noise genes).
From: Network-based support vector machine for classification of microarray samples
Test Error (SE) | # False Negative (SE) | Model Size (SE) | ||||
|---|---|---|---|---|---|---|
Method | p = 550 | p = 1, 100 | p = 550 | p = 1, 100 | p = 550 | p = 1, 100 |
STD | 0.305 (0.003) | 0.354 (0.002) | 0.0 (0.0) | 0.0 (0.0) | 550 (0.0) | 1,100 (0.0) |
L1 | 0.218 (0.004) | 0.235 (0.004) | 16.6 (0.2) | 17.1 (0.2) | 16.1 (1.0) | 19.2 (1.2) |
New (w = 1) | 0.232 (0.003) | 0.255 (0.004) | 14.9 (0.3) | 15.6 (0.3) | 20.7 (1.1) | 22.6 (1.4) |
New (w = ) | 0.202 (0.004) | 0.221 (0.004) | 5.7 (0.5) | 6.7 (0.6) | 32.6 (1.5) | 34.6 (1.9) |
New (w = d) | 0.170 (0.003) | 0.180 (0.004) | 0.7 (0.3) | 1.3 (0.4) | 82.6 (5.4) | 98.9 (7.2) |