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Table 4 Parkinson's disease data: 1,070 genes. A total of 1,070 genes with SD of expression levels across the 105 samples ≥ 15 had network information. The classification error, number of selected disease genes, number of selected genes, and their standard errors (SE in parentheses) were obtained by averaging over 10 runs. Five disease genes were UBE1, PARK2, UBB, SEPT5, and SNCAIP.

From: Network-based support vector machine for classification of microarray samples

Method

Error

# Disease Genes

# Genes

STD

0.424 (0.016)

5.0 (0.0)

1,070.0 (0.0)

L1

0.464 (0.021)

0.1 (0.1)

19.2 (3.8)

New (w = 1)

0.476 (0.015)

0.1 (0.1)

24.9 (4.3)

New (w = d MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaWaaOaaaeaacqWGKbazaSqabaaaaa@2D41@ )

0.480 (0.026)

0.2 (0.1)

30.6 (5.2)

New (w = d)

0.451 (0.028)

0.0 (0.0)

70.6 (14.1)

Final Model

-

1.0

75.0