Table 4 Top GO terms (process, function, component) of the biclusters in Figure 4.
From: Biclustering of gene expression data using reactive greedy randomized adaptive search procedure
Bicluster | Process | Function | Component |
|---|---|---|---|
B1 | DNA-dependent DNA replication (9, 1.40e-11), DNA replication (9, 3.48e-10), DNA metabolic process(11, 5.45e-09), DNA repair (8, 4.20e-07) | double-stranded DNA binding (4, 4.09e-06), structure-specific DNA binding (4, 8.45e-05), sequence-specific DNA binding(4, 4.5e-04) | replication fork (7,4.10e-11), chromosomal part(8, 2.77e-07) Chromosome(8, 7.84e-07) |
B2 | Translation (32,2.87e-15), Cellular protein metabolic process (36, 3.59e-9), Protein metabolic process(36, 4.81e-9), Cellular macromolecule biosynthetic process(36,2.51e-08) | Structural constituent of ribosome (28, 3.59e-25) Structural molecule activity (28, 4.71e-20) Translation elongation factor activity (3, .00213) | Cytosolic ribosome (29, 8.7e-30), Cytosolic part (29, 1.2e-26) Ribosome(29, 1.09e-25), Ribosomal subunit(32, 1.13e-24), Ribonucleoprotein complex(34, 7.48e-18) Cytosol (33, 2.05e-17) |
B3 | Cell cycle process (6, 0.00055), Cell cycle(6, 0.00109), Mitotic cell cycle(5, 0.00145), Cell cycle phase(5, 0.00505) | Kinase regular activity (2, 0.00410) | Cellular bud (6, 1.73e-06), Site of polarized growth(6, 1.87e-06) Cellular bud neck(5, 2.22e-05) Incipient cellular bud site(3,0.00129) |
B4 | Ribonucleoprotein complex biogenesis and assembly (10, 2.08e-07) Ribosome biogenesis(9, 1.07e-06) | Methyl transferase activity (3,8.56e-03) Transferase activity, transferring one-carbon groups(3,9.17e-03) | Organelle lumen(9,1.2e-04) Intracellular organelle lumen(9, 1.2e-04) Nuclear lumen(8, 2.2e-04) Nucleolus(6, 5.9e-04) |