Skip to main content

Table 3 True bidirectional promoters we predict.

From: Searching for bidirectional promoters in Arabidopsis thaliana

ID Pair1 Pair2 TRR GO term Function description
1 AT1G17600 AT1G17610 34.0984 GO:0005524 MF
GO:0004888 MF
ATP binding transmembrane receptor activity
2 AT3G51560 AT3G51570 34.6648 GO:0005524 MF
GO:0004888 MF
ATP binding transmembrane receptor activity
3 AT1G72840 AT1G72850 34.9711 GO:0005524 MF
GO:0004888 MF
ATP binding transmembrane receptor activity
4 AT4G36140 AT4G36150 47.5045 GO:0005524 MF
GO:0004888 MF
ATP binding transmembrane receptor activity
5 AT5G40090 AT5G40100 52.8796 GO:0005524 MF
GO:0004888 MF
ATP binding transmembrane receptor activity
6 AT2G23070 AT2G23080 31.2655 GO:0006468 BP protein amino acid phosphorylation
7 AT1G07550 AT1G07560 38.9944 GO:0006468 BP protein amino acid phosphorylation
8 AT5G35380 AT5G35390 40.0246 GO:0006468 BP protein amino acid phosphorylation
9 AT3G46920 AT3G46930 44.4623 GO:0004712 MF
GO:0006468 BP
protein serine/threonine/tyrosine kinase activity protein amino acid phosphorylation
10 AT3G57710 AT3G57720 49.5564 GO:0006468 BP protein amino acid phosphorylation
11 AT3G01940 AT3G01950 36.6986 GO:0031225 CC anchored to membrane
12 AT2G48130 AT2G48140 59.6507 GO:0008289 MF
GO:0031225 CC
GO:0006869 BP
lipid binding anchored to membrane lipid transport
13 AT5G37415 AT5G37420 32.2238 GO:0003700 MF transcription factor activity
14 AT5G41020 AT5G41030 55.2906 GO:0003700 MF transcription factor activity
15 AT4G38840 AT4G38850 35.204 GO:0009733 BP response to auxin stimulus
16 AT5G18050 AT5G18060 36.3317 GO:0009733 BP response to auxin stimulus
17 AT5G19420 AT5G19430 49.0875 GO:0008270 MF zinc ion binding
18 AT2G28910 AT2G28920 54.0639 GO:0008270 MF zinc ion binding
19 AT2G19720 AT2G19730 30.9849 GO:0003735 MF structural constituent of ribosome
20 AT1G50940 AT1G50950 41.0419 GO:0009055 MF electron carrier activity
21 AT4G30680 AT4G30690 44.2758 GO:0003743 MF translation initiation factor activity
22 AT1G09080 AT1G09090 46.4263 GO:0009408 BP response to heat
23 AT1G65130 AT1G65140 52.4771 GO:0016790 MF
GO:0004843 MF
thiolester hydrolase activity ubiquitin-specific protease activity
24 AT5G47250 AT5G47260 52.5492 GO:0006511 BP ubiquitin-dependent protein catabolic process
25 AT3G08000 AT3G08010 55.2916 GO:0003723 MF RNA binding
26 AT5G01680 AT5G01690 56.6963 GO:0005451 MF monovalent cation: proton antiporter activity
27 AT5G45250 AT5G45260 62.0555 GO:0042742 BP defense response to bacterium
  1. Pair1 and pair2 represent the loci of two genes in a bidirectional gene pair, and "CC", "MF" and "BP" are acronyms of "cellular component", "molecular function" and "biological process"