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Table 4 Top 20 target genes associated with stress responses.

From: Computational identification of condition-specific miRNA targets based on gene expression profiles and sequence information

Locus ID miRNA Rate Description
At5g43760 miR854 0.88 A member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA
At5g47250 miR472 0.79 Disease resistance protein
At3g20710 miR859 0.79 F-box/Kelch-repeat protein
At2g36890* miR847 0.60 Myb-like transcription factor MYB38
At4g28310 miR837-5p 0.60 Unknown protein
At5g41410 miR414 0.55 Homeodomain protein required for ovule identity
At2g25980 miR846 0.53 Jacalin lectin family protein
At5g57590 miR396 0.52 Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase
At1g49750 miR854 0.47 Leucine-rich repeat family protein
At5g39710 miR400 0.47 Similar to pentatricopeptide (PPR) repeat-containing protein
At3g13690 miR419 0.47 Protein kinase family protein
At3g18980 miR859 0.45 F-box family protein
At5g43730 miR472 0.45 Disease resistance protein
At2g32760 miR414 0.43 Unknown protein
At1g74840* miR863-5p 0.43 Myb family transcription factor
At1g80340 miR835-5p 0.42 Encodes a protein with gibberellin 3 β-hydroxylase activity
At1g26210 miR414 0.41 unknown protein
At2g17830 miR859 0.41 F-box family protein
At4g14680 miR395 0.40 ATP sulfurylase
At5g61480 miR870 0.38 Leucine-rich repeat transmembrane protein kinase
  1. The targets were predicted with the expression dataset of stress treatments. The rate indicates the fraction of runs in which the gene was predicted as a positive in 200 runs. * indicates the gene reported to be involved in the stress responses.