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Figure 2 | BMC Bioinformatics

Figure 2

From: Advanced analysis and visualization of gene copy number and expression data

Figure 2

Example plots of ECN-tool. On left, the gene copy number levels (y-axis) of all chromosomes of the sample T104 are plotted against genomic location in basepair units (x-axis) annotated based on the gene expression levels. Over-expressed genes are annotated in red and under-expressed genes with green. The boundaries of colors indicating the expression levels are explained in the left top corner of the figure. On right, the values of the chromosome 3 of the same sample T104 are plotted against the cumulative basepairs. Interpolated values are indicated with grey circles around the spots.

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