Table 3 Summary of number of lignin biosynthesis genes in each gene family across the 15 species studied.
From: Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom
Species | CAD | CCoAMT | 4CL | CCR | PAL | C4H | HCT | COMT | C3H | F5H | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
O. tauri | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 |
O. RCC809 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 |
O. lucimarinus | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 |
Phaeodactylum | 1 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 5 |
Thalassiosira | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Chlamydomonas | 4 | 2 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 10 |
Laccaria bicolor | 2 | 1 | 5 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 10 |
Volvox | 3 | 2 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 7 |
Physcomitrella | 4 | 2 | 11 | 7 | 14 | 4 | 4 | 3 | 1 | 0 | 50 |
Spike moss | 18 | 8 | 26 | 29 | 2 | 2 | 6 | 28 | 2 | 0 | 121 |
Arabidopsis | 9 | 7 | 13 | 7 | 4 | 1 | 1 | 16 | 3 | 2 | 63 |
Medicago | 21 | 4 | 10 | 18 | 4 | 1 | 6 | 26 | 1 | 3 | 93 |
Sorghum | 14 | 7 | 15 | 44 | 8 | 3 | 4 | 41 | 2 | 3 | 141 |
Rice | 5 | 11 | 16 | 55 | 14 | 4 | 9 | 38 | 1 | 3 | 157 |
Poplar | 21 | 7 | 22 | 40 | 6 | 3 | 7 | 35 | 4 | 4 | 149 |
Total | 110 | 55 | 120 | 207 | 55 | 18 | 37 | 187 | 14 | 15 | 818 |