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Table 2 Vertex and edge counts. The numbers of vertices and edges in graphs constructed at thresholds identified by various methods.

From: Threshold selection in gene co-expression networks using spectral graph theory techniques

Vertex and edge counts

 

Spectral

Adj. p < 0.05

Adj. p < 0.01

1%

 

Vertices

Edges

Vertices

Edges

Vertices

Edges

Vertices

Edges

Yeast

1652

4746

6177

665, 859

6174

463, 000

6108

212, 127

Human

6163

66, 126

22, 283

50, 202, 163

22, 283

44, 057, 599

17, 757

2, 843, 536