Skip to main content

Table 1 Standard set of tool parameters

From: Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data

Parameter Value
Maximum p value 0.10
Maximum GO depth 5
False discovery correction FDR
Statistical method OntoExpress & EasyGO: Hypergeometric
GOstat & DAVID: Fisher's Exact
  1. A consistent set of tool parameters was used where possible to make the results more comparable. Note that there was no one set of statistical methods available for all tools.