Efficient alignment-free DNA barcode analytics

BMC Bioinformatics

Table 8 Top-100 spectrum features for Astraptes data set

rank	feature	rank	feature	rank	feature	rank	feature
1	TATACCAACA	26	CTTATATCAA	51	AATGGAGCTG	76	GGAGGAGACC
2	TTATACCAAC	27	TATATCAACA	52	ATGGAGCTGG	77	ATCTTGCCGG
3	TGAAAATGGA	28	TATCAACACT	53	GAAAATGGAG	78	CATCTTGCCG
4	AACTTCTTTA	29	TCAACACTTA	54	AATATACGAA	79	TCATCTTGCC
5	ACTTCTTTAA	30	TCTTATATCA	55	ATATACGAAT	80	CCGGTATTTC
6	CTTCTTTAAG	31	TTATATCAAC	56	ATTAATATAC	81	CGGTATTTCA
7	CTTTAAGATT	32	ACCCCCATCT	57	TAATATACGA	82	CTTGCCGGTA
8	TCTTTAAGAT	33	ATTACCCCCA	58	TATACGAATT	83	GCCGGTATTT
9	TTCTTTAAGA	34	ATTATTACCC	59	TATTAATATA	84	TCTTGCCGGT
10	TTTAAGATTA	35	TACCCCCATC	60	TTAATATACG	85	TGCCGGTATT
11	GAACTTCTTT	36	TATTACCCCC	61	AAAATGGGGC	86	TTGCCGGTAT
12	GGAACTTCTT	37	TTACCCCCAT	62	AAATGGGGCT	87	ATACGAATTA
13	TGGAACTTCT	38	TTATTACCCC	63	AATGGGGCTG	88	TACGAATTAA
14	AATCTTATAC	39	AATAATAGGT	64	ATGGGGCTGG	89	ACGAATTAAT
15	ACCAACACTT	40	AATAGGTGCC	65	GAAAATGGGG	90	AATATGCGAA
16	ATACCAACAC	41	AGGTGCCCCA	66	GGCTGGTACA	91	ATATGCGAAT
17	ATCTTATACC	42	ATAGGTGCCC	67	GGGCTGGTAC	92	ATGCGAATTA
18	CCAACACTTA	43	GGTGCCCCAG	68	GGGGCTGGTA	93	ATTAATATGC
19	CTTATACCAA	44	GTGCCCCAGA	69	TGAAAATGGG	94	GCGAATTAAT
20	TACCAACACT	45	TAGGTGCCCC	70	TGGGGCTGGT	95	TAATATGCGA
21	TCTTATACCA	46	TTGATTATTA	71	AGGAGACCCA	96	TATGCGAATT
22	AATCTTATAT	47	TGGAGGATTT	72	AGGAGGAGAC	97	TATTAATATG
23	ATATCAACAC	48	TGCCCCAGAT	73	GAGACCCAAT	98	TGCGAATTAA
24	ATCAACACTT	49	AAAATGGAGC	74	GAGGAGACCC	99	TTAATATGCG
25	ATCTTATATC	50	AAATGGAGCT	75	GGAGACCCAA	100	AATTGGAGGA

ISSN: 1471-2105