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Table 2 Overview of the number of GEO datasets for concepts in the neoplastic process and disease or syndrome category

From: Ontology-driven indexing of public datasets for translational bioinformatics

GDS

Concept name

CUI

Semantic type

Examples of cancers with many GEO datasets

26

Breast cancer

C0006142

Neoplastic Process

11

Acute myeloid leukemia

C0023467

Neoplastic Process

5

Acute lymphoblastic leukemia

C0023449

Neoplastic Process

Examples of cancers with few GEO datasets

1

Kaposi's sarcoma

C0036220

Neoplastic Process

1

Acute promyelocytic leukemia

C0023487

Neoplastic Process

1

Pleural mesothelioma

C1377913

Neoplastic Process

Examples of diseases with many GEO datasets

13

Duchenne dystrophy

C0013264

Disease or Syndrome

6

Arthritis

C0003864

Disease or Syndrome

4

Chronic obstructive pulmonary disease

C0024117

Disease or Syndrome

Examples of diseases with few GEO datasets

1

Open-angle glaucoma

C0017612

Disease or Syndrome

1

Purpura thrombocytopenic

C0857305

Disease or Syndrome

1

Corneal dystrophy

C0010035

Disease or Syndrome