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Table 4 Multi-class remote fold recognition performance using the mismatch(5,1) kernel

From: Efficient use of unlabeled data for protein sequence classification: a comparative study

Method Error Top-5 Error Balanced Error Top-5 Balanced Error F1 Top-5 F1
full sequence 50.49 22.31 76.44 38.61 24.96 65.58
region 44.79 13.36 67.26 25.40 33.17 77.45
no tails (full seq.) 51.79 20.85 79.66 35.72 22.72 66.68
max. length (full seq.) 56.03 26.06 86.68 47.05 15.04 58.36