Table 4 Multi-class remote fold recognition performance using the mismatch(5,1) kernel
From: Efficient use of unlabeled data for protein sequence classification: a comparative study
Method | Error | Top-5 Error | Balanced Error | Top-5 Balanced Error | F1 | Top-5 F1 |
|---|---|---|---|---|---|---|
full sequence | 50.49 | 22.31 | 76.44 | 38.61 | 24.96 | 65.58 |
region | 44.79 | 13.36 | 67.26 | 25.40 | 33.17 | 77.45 |
no tails (full seq.) | 51.79 | 20.85 | 79.66 | 35.72 | 22.72 | 66.68 |
max. length (full seq.) | 56.03 | 26.06 | 86.68 | 47.05 | 15.04 | 58.36 |