Table 1 Example annotation in the PRO association file (PAF).
PRO_ID | Object_term | Qual | Relation | Ontology_ID | Ontology_term | Ev.Source (PMID) | DB_ID (UniProt) | Modified_residue, MOD_ID |
|---|---|---|---|---|---|---|---|---|
PRO:000000535 | c-myc isoform 1 acetylated 1 | Â | has_function | GO:0003700 | transcription factor activity | 16126174 | P01106-1 | Lys-143/Lys-157/Lys-275/Lys-317/Lys-323/Lys-371, MOD:00394 |
PRO:000000535 | c-myc isoform 1 acetylated 1 | Â | located_in | GO:0005634 | nucleus | 16126174 | P01106-1 | Lys-143/Lys-157/Lys-275/Lys-317/Lys-323/Lys-371, MOD:00394 |
PRO:000000535 | c-myc isoform 1 acetylated 1 | Â | part_of | GO:0005667 | transcription factor complex | 16126174 | P01106-1 | Lys-143/Lys-157/Lys-275/Lys-317/Lys-323/Lys-371, MOD:00394 |
PRO:000000535 | c-myc isoform 1 acetylated 1 | Â | has_modification | MOD:00394 | acetylated residue | 16126174 | P01106-1 | Lys-143/Lys-157/Lys-275/Lys-317/Lys-323/Lys-371, MOD:00394 |
PRO:000000536 | c-myc isoform 1 glycosylated 1 | Â | has_function | GO:0003700 | transcription factor activity | 11904304 | P01106-1 | Thr-58, MOD:00806 |
PRO:000000536 | c-myc isoform 1 glycosylated 1 | Â | participates_in | GO:0006357 | regulation of transcription from RNA polymerase II promoter | 11904304 | P01106-1 | Thr-58, MOD:00806 |
PRO:000000536 | c-myc isoform 1 glycosylated 1 | Â | has_modification | MOD:00806 | O-(N-acetylaminoglucosyl)-L-threonine | 11904304 | P01106-1 | Thr-58, MOD:00806 |
PRO:000000537 | c-myc isoform 1 phosphorylated 1 | Â | has_function | GO:0003700 | transcription factor activity | 11018017 | P01108-1 | Ser-62, MOD:00046 |
PRO:000000537 | c-myc isoform 1 phosphorylated 1 | Â | located_in | GO:0005634 | nucleus | 11018017 | P01108-1 | Ser-62, MOD:00046 |
PRO:000000537 | c-myc isoform 1 phosphorylated 1 | Â | part_of | GO:0005667 | transcription factor complex | 11018017 | P01108-1 | Ser-62, MOD:00046 |
PRO:000000537 | c-myc isoform 1 phosphorylated 1 | Â | participates_in | GO:0006357 | regulation of transcription from RNA polymerase II promoter | 11018017 | P01108-1 | Ser-62, MOD:00046 |
PRO:000000537 | c-myc isoform 1 phosphorylated 1 | Â | participates_in | GO:0008283 | cell proliferation | 11018017 | P01108-1 | Ser-62, MOD:00046 |
PRO:000000537 | c-myc isoform 1 phosphorylated 1 | Â | participates_in | GO:0055072 | iron ion homeostasis | 11018017 | P01108-1 | Ser-62, MOD:00046 |
PRO:000000537 | c-myc isoform 1 phosphorylated 1 | Â | has_modification | MOD:00046 | O-phospho-L-serine | 11018017 | P01108-1 | Ser-62, MOD:00046 |
PRO:000000538 | c-myc isoform 1 phosphorylated 2 | NOT | has_function | GO:0003700 | transcription factor activity | 7623799 | P01106-1 | Ser-62, MOD:00046|Thr-58, MOD:00047 |
PRO:000000538 | c-myc isoform 1 phosphorylated 2 | Â | located_in | GO:0005634 | nucleus | 14563837 | P01108-1 | Ser-62, MOD:00046|Thr-58, MOD:00047 |
PRO:000000538 | c-myc isoform 1 phosphorylated 2 | Â | has_modification | MOD:00046 | O-phospho-L-serine | 14563837 | P01108-1 | Ser-62, MOD:00046|Thr-58, MOD:00047 |
PRO:000000538 | c-myc isoform 1 phosphorylated 2 | Â | has_modification | MOD:00047 | O-phospho-L-threonine | 14563837 | P01108-1 | Ser-62, MOD:00046|Thr-58, MOD:00047 |
PRO:000000539 | c-myc isoform 1 phosphorylated 3 | Â | located_in | GO:0005634 | nucleus | 12676581 | P01106-1 | Ser-62/Ser-71, MOD:00046 |
PRO:000000539 | c-myc isoform 1 phosphorylated 3 | Â | participates_in | GO:0045766 | positive regulation of angiogenesis | 12676581 | P01106-1 | Ser-62/Ser-71, MOD:00046 |
PRO:000000539 | c-myc isoform 1 phosphorylated 3 | Â | has_modification | MOD:00046 | O-phospho-L-serine | 12676581 | P01106-1 | Ser-62/Ser-71, MOD:00046 |
PRO:000000480 | smad6 isoform 2 | NOT | has_part | Pfam:PF03165 | MH1 domain | 11284962 | O43541-2 | Â |