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Figure 1 | BMC Bioinformatics

Figure 1

From: DoOPSearch: a web-based tool for finding and analysing common conserved motifs in the promoter regions of different chordate and plant genes

Figure 1

Different number of conserved motifs from different taxonomic groups. The PTPN23 (protein tyrosine phosphatase, non-receptor type 23) promoter cluster contains sequences from 19 different species. If the multiple alignment is made from all the sequences (subset F) we only find one conserved motif (m1). If we narrow down the taxonomic group to Theria (subset T), Eutheria (subset E) or Primates (subset P), we find 7, 9 and 23 conserved motifs respectively. The screenshots have been taken from the 500 base pair promoter cluster pages of the PTPN23 gene in the DoOP database.

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BMC Bioinformatics

ISSN: 1471-2105

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