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Table 6 Overall F1 measure of the entire classification. The global F1 measure of the classification problem is computed by two different types of averages: micro-average and macro-average. In micro-averaging, the F1 measure is calculated globally over all categories, while in macro-averaging, F1 is computed locally over each category first, and then the average over all categories is taken.

From: Annotation of protein residues based on a literature analysis: cross-validation against UniProtKb

F1(micro-averaged) 0.56 0.55
F1(macro-averaged) 0.43 0.19