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Table 6 Performance comparison with other systems (LLL)

From: Walk-weighted subsequence kernels for protein-protein interaction extraction

PPI system

Method

Precision

Recall

F-M

[6]

rule based

68

78

72

[8]

sentence alignment & FST

50.0

53.8

51.8

[13]

walk kernel

72.5

83.3

77.5

[29]

Markov logic model

65.0

72.2

68.4

Our system

walk weighted subsequence kernel

79.3

85.1

82.1

  1. The comparisons with other systems, which were accessed by LLL task's external evaluation, are shown.