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Table 8 Performance comparison with other systems (5 PPI corpora)

From: Walk-weighted subsequence kernels for protein-protein interaction extraction

PPI system AIMed BioInfer HPRD50 IEPA LLL
  P R F P R F P R F P R F P R F
[14] 52.9 61.8 56.4 47.7 59.9 52.9 63.4 65.8 63.4 69.6 82.7 75.1 72.5 87.2 76.8
[16] 55.0 68.8 60.8 65.7 71.1 68.1 68.5 76.1 70.9 67.5 78.6 71.7 77.6 86.0 80.1
[18] 40 50 44 39 45 41 76 64 69 74 61 67 82 72 77
Our system 61.4 53.3 56.6 61.8 54.2 57.6 66.7 69.2 67.8 73.8 71.8 72.9 76.9 91.2 82.4
  1. Our walk-weighted subsequence kernel was compared with other recent systems which were evaluated on 5 PPI corpora.