Table 8 Performance comparison with other systems (5 PPI corpora)
From: Walk-weighted subsequence kernels for protein-protein interaction extraction
PPI system | AIMed | BioInfer | HPRD50 | IEPA | LLL | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | P | R | F | P | R | F | P | R | F | P | R | F | P | R | F |
[14] | 52.9 | 61.8 | 56.4 | 47.7 | 59.9 | 52.9 | 63.4 | 65.8 | 63.4 | 69.6 | 82.7 | 75.1 | 72.5 | 87.2 | 76.8 |
[16] | 55.0 | 68.8 | 60.8 | 65.7 | 71.1 | 68.1 | 68.5 | 76.1 | 70.9 | 67.5 | 78.6 | 71.7 | 77.6 | 86.0 | 80.1 |
[18] | 40 | 50 | 44 | 39 | 45 | 41 | 76 | 64 | 69 | 74 | 61 | 67 | 82 | 72 | 77 |
Our system | 61.4 | 53.3 | 56.6 | 61.8 | 54.2 | 57.6 | 66.7 | 69.2 | 67.8 | 73.8 | 71.8 | 72.9 | 76.9 | 91.2 | 82.4 |