OrgConv: detection of gene conversion using consensus sequences and its application in plant mitochondrial and chloroplast homologs

Table 2 Performance of mtcpconv, geneconv, and RDP on a various number of mitochondrial atp1 and chloroplast atpA sequences in different angiosperm groups

^†mtcpconv and geneconv were run on a 3 GHz Intel vPro, 3 GB RAM, Linux Fedora 10 machine, while RDP was run on a 2.2 GHz AMD Athlon, 2 GB RAM, Window XP machine.
^§mt sequences and cp sequences were combined into one file when analyzed using geneconv and RDP.
^‡The relationship of the five groups is shown in Figure 3.

ISSN: 1471-2105