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Table 2 Comparison of de novo sequencing performance.

From: A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry

Algorithm Threshold Sequence Tag Intersection Spectra Accuracy Average Tag Length Sequenced Spectra
Vonode 8.0 Top 4897 75% 6.2 7142
  4.0 Top 8771 72% 5.5 14264
  4.0 Consensus 7220 84% 5.0 11422
PepNovo 0.9 Top 1293 70% 6.0 1821
  0.8 Top 2460 65% 6.0 3716
  0.8 Consensus 2160 78% 4.7 3253