Table 2 Comparison of results with some other residue-based potential function
Decoy set | Protein | DFIRE | Rosetta | ModPipe Pair | ModPipe Surf | ModPipe Comb | Dope | PC2CA | Force model | TE13 | LHL | MJ | Surfield |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4state_reduced | 1ctf | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| Â | 1r69 | 1 | 2 | 1 | 17 | 1 | 1 | 1 | 8 | 1 | 1 | 1 | 1 |
| Â | 1sn3 | 1 | 1 | 1 | 7 | 1 | 1 | 1 | 23 | 6 | 1 | 2 | 1 |
| Â | 2cro | 1 | 5 | 1 | 103 | 1 | 1 | 1 | 4 | 1 | 1 | 1 | 1 |
| Â | 3icb | 4 | 6 | 15 | 33 | 8 | 1 | 1 | 2 | - | 5 | - | 1 |
| Â | 4pti | 1 | 1 | 1 | 71 | 1 | 1 | 1 | 13 | 7 | 1 | 3 | 1 |
| Â | 4rxn | 1 | 1 | 1 | 18 | 1 | 1 | 667 | 85 | 16 | 51 | 1 | 1 |
fisa | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
| Â | 1fc2 | 254 | 158 | 491 | 1 | 453 | 357 | 1 | 1 | - | - | - | 1 |
| Â | 1hdd-c | 1 | 90 | 293 | 18 | 135 | 1 | 1 | 1 | - | - | - | 1 |
| Â | 2cro | 1 | 26 | 11 | 146 | 19 | 1 | 1 | 1 | - | - | - | 1 |
| Â | 4icb | 1 | 1 | 196 | 2 | 167 | 1 | 1 | 1 | - | - | - | 1 |
lmds | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
| Â | 1bba | 501 | 174 | 501 | 117 | 444 | 501 | 501 | 1 | - | 217 | - | 1 |
| Â | 1fc2 | 501 | 291 | 325 | 54 | 222 | 476 | 53 | 1 | 1 | 1 | 1 | 1 |
| Â | 1ctf | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 14 | 500 | 501 | 1 |
| Â | 1dtk | 1 | 9 | 4 | 1 | 1 | 1 | 2 | 1 | 5 | 2 | 13 | 1 |
| Â | 1igd | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 2 | 9 | 1 | 1 |
| Â | 1shf-a | 1 | 5 | 24 | 18 | 7 | 1 | 1 | 1 | 1 | 17 | 11 | 1 |
| Â | 2cro | 1 | 2 | 4 | 28 | 12 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| Â | 2ovo | 1 | 29 | 5 | 8 | 2 | 1 | 1 | 1 | 1 | 3 | 2 | 1 |
| Â | 4pti | 1 | 4 | 1 | 44 | 1 | 1 | 1 | 1 | - | 9 | - | 1 |