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Table 1 Performance comparison of COCA, PCA-based and variance-based ranking (VR) approaches.

From: Knowledge-guided gene ranking by coordinative component analysis

  Alpha-factor arrest CDC15 arrest CDC28 arrest
  COCA PCA-based VR COCA PCA-based VR COCA PCA-based VR
M/G1 0.8477 0.8277 0.5685 0.9045 0.7594 0.5854 0.7904 0.7661 0.6524
G2 0.8182 0.7172 0.6523 0.8888 0.6979 0.5547 0.8036 0.6767 0.7418
M 0.7731 0.7537 0.6705 0.8873 0.7365 0.5572 0.8448 0.7585 0.5685
G1 0.9123 0.821 0.6611 0.9172 0.7119 0.5521 0.9032 0.7524 0.792
S 0.8763 0.7641 0.7054 0.9478 0.6867 0.6385 0.8532 0.7058 0.799
  1. Area under ROC curves (AUCs) are summarized in the table for ranking cell cycle-related genes in five yeast cell cycle phases, i.e., M/G1, G1, S, G2 and M, respectively