Table 1 Basic information on MAQC sample A vs B data sets
From: Gene set enrichment meta-learning analysis: next- generation sequencing versus microarrays
Name | Platform | Number of A/B samples | Expression measurements | Common mapped genes |
|---|---|---|---|---|
AFX 1 | Affymetrix HG-U133 Plus 2.0 | 5/5 | 54,675 | 15,578 |
AFX 2 | Affymetrix HG-U133 Plus 2.0 | 5/5 | 54,675 | 15,578 |
AFX 3 | Affymetrix HG-U133 Plus 2.0 | 5/5 | 54,675 | 15,578 |
AFX 4 | Affymetrix HG-U133 Plus 2.0 | 5/5 | 54,675 | 15,578 |
AFX 5 | Affymetrix HG-U133 Plus 2.0 | 5/5 | 54,675 | 15,578 |
AFX 6 | Affymetrix HG-U133 Plus 2.0 | 5/5 | 54,675 | 15,578 |
TSEQ | Roche 454 Genome Sequencer | 5/7 | 24,655 | 15,578 |
ODT | Roche 454 Genome Sequencer | 5/5 | 24,655 | 15,578 |