From: Gene set enrichment meta-learning analysis: next- generation sequencing versus microarrays
Selection method | Short name | Reference |
---|---|---|
T-statistic | TTest | Boulesteix and Slawski, 2009 [8] |
Fold change | FC | Boulesteix and Slawski, 2009 [8] |
Wilcoxon statistic | Wilcoxon | Boulesteix and Slawski, 2009 [8] |
Welch T-statistic | WelchT | Boulesteix and Slawski, 2009 [8] |
Bayesian t-statistic 1 | BaldiLong | Baldi and Long, 2001 [9] |
Bayesian t-statistic 2 | FoxDimmic | Fox and Dimmic, 2006 [10] |
Shrinkage t-statistic | ShrinkageT | Opgen-Rhein and Strimmer, 2007 [11] |
Soft-threshold t-statistic | SoftthresholdT | Wu, 2005 [12] |
Parametric empirical Bayes | Limma | Smyth, 2004 [13] |
Nonparametric empirical Bayes | Ebam | Efron et al., 2001 [14] |
Permutation test | Permutation | Â |