Table 3 Top 5 gene sets from TSEQ with corresponding ranks for enrichment in sample A
From: Gene set enrichment meta-learning analysis: next- generation sequencing versus microarrays
Gene set (phenotype A) | TSEQ | AFX1 | AFX2 | AFX3 | AFX4 | AFX5 | AFX6 | ODT (abs) |
|---|---|---|---|---|---|---|---|---|
PENG_GLUTAMINE_DN | 1 | 3 | 3 | 3 | 3 | 3 | 5 | 5 |
PENG_LEUCINE_DN | 2 | 11 | 11 | 9 | 11 | 9 | 12 | 13 |
TARTE_PLASMA_BLASTIC | 3 | 6 | 4 | 4 | 4 | 5 | 3 | 22 |
CHANG_SERUM_RESPONSE_UP | 4 | 8 | 8 | 8 | 8 | 8 | 13 | 28 |
BHATTACHARYA_ESC_UP | 5 | 5 | 7 | 7 | 6 | 7 | 7 | 7 |