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Table 2 False positive and negative rates by MAS5 and On/Off methods.

From: A robust method for estimating gene expression states using Affymetrix microarray probe level data

  False positive rate False negative rate
MAS5 1/59 (1.7%) 146/767 (19.0%)
ON/Off 4/59 (6.8%) 67/767 (8.7%)