Skip to main content

Table 2 pyrosequencing error rate of GS-20 platform

From: Artificial and natural duplicates in pyrosequencing reads of metagenomic data

  

Percentage by error types (%)

Project ID a

Error Rate b

Insertion

Deletion

Substitution

17265

0.00774

27.06

17.28

55.67

18637

0.00250

60.94

22.24

16.82

18819

0.01194

36.91

19.62

43.47

19265

0.00893

41.32

14.51

44.18

19449

0.00569

38.98

20.23

40.79

19543

0.00522

49.07

18.97

31.96

19701

0.01097

32.89

17.93

49.18

19743

0.00287

57.51

28.29

14.21

19981

0.00530

28.85

17.73

53.42

19989

0.00216

54.29

22.33

23.38

20067

0.00679

46.67

12.15

41.19

20095

0.00216

50.48

28.75

20.77

20167

0.00157

53.65

26.70

19.65

20635

0.00231

57.82

18.25

23.93

20655

0.00211

51.31

29.94

18.75

Average

0.00522

45.85

20.99

33.16

  1. aProject ID is the same as in Table 1.
  2. bError rate is calculated for aligned reads as the number of errors (insertion, deletion, and substitution) divided by the number of bases of reads.