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Table 2 Dynamic similarity p values for the 10 PDZ domains.

From: Dynamics based alignment of proteins: an alternative approach to quantify dynamic similarity

 

1qau

1ihj

1be9

1k32

1x5r

1y8t

1fc6

1qav

2i6v

2f0a

1qau

          

1ihj

4·10 -4

         

1be9

9·10 -11

0.34

        

1k32

0.62

0.76

0.74

       

1x5r

0.32

0.32

0.60

0.39

      

1y8t

0.61

0.47

0.58

0.62

0.36

     

1fc6

0.08

8·10 -3

0.78

0.76

0.65

0.19

    

1qav

1·10 -8

2·10 -3

1·10 -5

0.66

0.14

0.07

0.17

   

2i6v

0.68

0.78

0.58

0.70

0.71

0.55

0.81

0.59

  

2f0a

1·10 -4

3·10 -6

0.27

0.30

8·10 -4

0.14

0.47

6·10 -6

0.72

 
  1. Those that are significant (at the p < 0.05) are highlighted.