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Table 5 Results for permutation test for focal and limited peel-off peaks.

From: JISTIC: Identification of Significant Targets in Cancer

 

Peaks

Driver Peaks

P-value

Focal exclusive

49

9

7.3E-3

Limited peel-off exclusive

78

25

2.3E-3

Overlapping between both

46

14

3.5E-6

  1. The p-value for the permutation test estimates the probability of detecting as many peaks containing candidate driver genes if random regions of the same size across genome are selected. The table shows results for mutually exclusive peaks between focal GISTIC and limited peel-off and for overlapping peaks between both variants.
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BMC Bioinformatics

ISSN: 1471-2105

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