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Table 2 Performance of single folding indexes on set B

From: Predictors of natively unfolded proteins: unanimous consensus score to detect a twilight zone between order and disorder in generic datasets

 

S n

S p

f p

AUC

Poodle-W

0.74

0.98

0.02

0.95

gVSL2

0.81

0.94

0.06

0.94

<E c >

0.72

0.95

0.05

0.90

<P>

0.70

0.90

0.10

0.85

HQ

0.70

0.92

0.08

0.86

  1. Performance of HQ, mean packing <P>, mean pairwise energy <E c >, gVSL2 and Poodle-W in discriminating natively unfolded proteins from folded ones among those in the set B (Shimizu et al. [32]). Mean packing threshold is set at 20.55 and mean pairwise energy threshold is set at -0.37 a.e.u.
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BMC Bioinformatics

ISSN: 1471-2105

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