Skip to main content

Table 3 Statistics of the provided database.

From: Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis

Identifier type

Identifier name

Number of identifiers

Groups

_id

1439

PRIMe chemical standards

rlib

1287

RIKEN MS Library [33]

riken

241

Synonym

synonym

11180

Sum-formula

formula

951

CAS

cas

2416

KEGG Compounds [34]

kegg

1297

KEGG Pathway [34]

pathway

184

PubChem Compound [22]

cid

1857

PubChem Substance [35]

sid

1077

IUPAC Names

iupac

1928

SMILES

smiles

2666

InChI

inchi

1668

KNApSAcK [36]

knapsack

671

KaPPA-View [1]

kappav

261

LipidBank [37]

lipidbank

127

Lipid maps [38]

lipidmaps

178

ChEBI [13]

chebi

1177

Chemspider

chemspider

1001

MPIMP MS library [21]

mpimp

3439

PlantCyc Frame ID [25]

cycdb

495

  1. Statistics of the provided database. The number of groups is the total number of constructed distinct metabolite groups. Each group gathers one or more identifiers of the following listed identifier types.